diff --git a/README.md b/README.md index 4c6d159..c432eec 100644 --- a/README.md +++ b/README.md @@ -1,3 +1,42 @@ -# life-science-ai-prompts +# Life Science AI Prompts -Curated AI prompts for life sciences: genomics, proteomics, CRISPR, cell biology, and literature synthesis. Analogous to awesome-ai-for-science and awesome-genomic-skills. \ No newline at end of file +> *Where the prompts live, thrive, and reach the world.* + +Curated, versioned AI prompts for life sciences research. +Covers genomics, proteomics, CRISPR, cell biology, and literature synthesis. + +## Analogous Resources Ingested + +| Repository | Focus | Stars | +|---|---|---| +| [awesome-ai-for-science](https://github.com/ai-boost/awesome-ai-for-science) | AI tools across sciences | ★★★ | +| [Awesome-LLM-Agents-Scientific-Discovery](https://github.com/zjlrock777/Awesome-LLM-Agents-Scientific-Discovery) | LLM agents in biomedical research | ★★★ | +| [awesome-genomic-skills](https://github.com/GoekeLab/awesome-genomic-skills) | Genomic LLM agent skills | ★★★ | +| [awesome-computational-biology](https://github.com/inoue0426/awesome-computational-biology) | Computational biology resources | ★★★ | +| [Awesome-LLM-Scientific-Discovery](https://github.com/HKUST-KnowComp/Awesome-LLM-Scientific-Discovery) | LLMs for science | ★★★ | + +## Folder Structure + +``` +genomics/ — variant calling, RNA-seq, CRISPR +proteomics/ — structure, mass spectrometry, interactions +cell-biology/ — flow cytometry, microscopy, assays +literature/ — paper summarisation, methods extraction +``` + +## How to Use + +```python +import requests, base64 + +GITEA_URL = "https://promptnotes.ai" +TOKEN = "your-token" + +def read_prompt(owner, repo, path): + url = f"{GITEA_URL}/api/v1/repos/{owner}/{repo}/contents/{path}" + r = requests.get(url, headers={"Authorization": f"token {TOKEN}"}) + return base64.b64decode(r.json()["content"]).decode() + +prompt = read_prompt("promptadmin", "life-science-ai-prompts", + "genomics/variant-interpretation/snp-clinical-significance.md") +```