From 545d54e221cbf761e0f8a6ec6321874b50564e27 Mon Sep 17 00:00:00 2001 From: promptadmin Date: Sat, 27 Jun 2026 19:21:58 +0000 Subject: [PATCH] [upstream-sync] README.md from ai-boost/awesome-ai-for-science@600965b9 [catalogue] --- upstream/ai-boost-awesome-ai-for-science/catalogue/README.md | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/upstream/ai-boost-awesome-ai-for-science/catalogue/README.md b/upstream/ai-boost-awesome-ai-for-science/catalogue/README.md index 17f3c22..cef7be9 100644 --- a/upstream/ai-boost-awesome-ai-for-science/catalogue/README.md +++ b/upstream/ai-boost-awesome-ai-for-science/catalogue/README.md @@ -2,8 +2,8 @@ title: "Readme" task: "" lineage_type: import -upstream_source: https://github.com/ai-boost/awesome-ai-for-science/blob/3a7505d8/README.md -upstream_sha: 3a7505d8 +upstream_source: https://github.com/ai-boost/awesome-ai-for-science/blob/600965b9/README.md +upstream_sha: 600965b9 imported_at: 2026-06-27 prompt_class: catalogue upstream_changes: accepted @@ -204,6 +204,7 @@ validated: false - [OpenBioMed](https://github.com/PharMolix/OpenBioMed) - Open-source biomedical AI platform integrating multimodal foundation models (BioMedGPT, PharmolixFM, LangCell) with agentic workflows and 45+ Claude Code skills for drug discovery, protein engineering, and single-cell omics analysis (PharMolix & Tsinghua AIR, 1K+ stars, 2023-2026) - [AutoR](https://github.com/AutoX-AI-Labs/AutoR) - Human-centered research OS with terminal-first harness and local browser Studio, turning research work into reproducible artifact-backed runs through a 9-stage workflow with human approval gates, resume/rollback controls, and venue-aware manuscript packaging (1K+ stars, 2026) - [ScholarAIO](https://github.com/ZimoLiao/scholaraio) - Agent-agnostic research infrastructure providing AI agents with a structured scientific workspace for deep PDF parsing, hybrid semantic/keyword literature search, citation-graph analysis, topic discovery, and academic writing workflows; natively integrates with Claude Code, Codex, Cursor, Cline, and AgentSkills.io (530+ stars, MIT License, 2026) +- [BioMCP](https://github.com/genomoncology/biomcp) - Biomedical Model Context Protocol (MCP) server unifying literature search across PubMed/Europe PMC, entity pivoting across genes/variants/drugs/diseases/pathways/proteins, local study analytics, and Claude Code/Codex integration for agentic biomedical research (531+ stars, MIT License, 2025-2026) ### Literature Management Plugins - [llm-for-zotero](https://github.com/yilewang/llm-for-zotero) - Research agent system deeply integrated with Zotero supporting Agent Mode, skills, multi-model backends (OpenAI-compatible, Claude Code, WebChat, Codex), and MinerU PDF parsing for literature Q&A, summarization, figure inspection, and source comparison (1.3K+ stars, 2026) -- 2.54.0