drug-discovery-prompts/upstream/K-Dense-AI-scientific-agent-skills/skills/open-notebook/references/configuration.md

title, task, lineage_type, upstream_source, upstream_sha, imported_at, prompt_class, upstream_changes, author, validated

title	task	lineage_type	upstream_source	upstream_sha	imported_at	prompt_class	upstream_changes	author	validated
Open Notebook Configuration Guide		import	https://github.com/K-Dense-AI/scientific-agent-skills/blob/9c9bd2e9/skills/open-notebook/references/configuration.md	9c9bd2e9	2026-06-27	prompt	accepted	upstream	false

Open Notebook Configuration Guide

Docker Deployment

Open Notebook is deployed as a Docker Compose stack with two main services: the application server and SurrealDB.

Minimal docker-compose.yml

version: "3.8"

services:
  surrealdb:
    image: surrealdb/surrealdb:latest
    command: start --user root --pass root rocksdb://data/database.db
    volumes:
      - surrealdb_data:/data
    ports:
      - "8000:8000"

  open-notebook:
    image: ghcr.io/lfnovo/open-notebook:latest
    depends_on:
      - surrealdb
    environment:
      - OPEN_NOTEBOOK_ENCRYPTION_KEY=${OPEN_NOTEBOOK_ENCRYPTION_KEY}
      - SURREAL_URL=ws://surrealdb:8000/rpc
      - SURREAL_NAMESPACE=open_notebook
      - SURREAL_DATABASE=open_notebook
    ports:
      - "8502:8502"   # Frontend UI
      - "5055:5055"   # REST API
    volumes:
      - on_uploads:/app/uploads

volumes:
  surrealdb_data:
  on_uploads:

Starting the Stack

# Set the encryption key (required)
export OPEN_NOTEBOOK_ENCRYPTION_KEY="your-secure-random-key"

# Start services
docker-compose up -d

# View logs
docker-compose logs -f open-notebook

# Stop services
docker-compose down

# Stop and remove data
docker-compose down -v

Environment Variables

Required

Variable	Description
OPEN_NOTEBOOK_ENCRYPTION_KEY	Secret key for encrypting stored API credentials. Must be set before first launch and kept consistent.

Database

Variable	Default	Description
SURREAL_URL	ws://surrealdb:8000/rpc	SurrealDB WebSocket connection URL
SURREAL_NAMESPACE	open_notebook	SurrealDB namespace
SURREAL_DATABASE	open_notebook	SurrealDB database name
SURREAL_USER	root	SurrealDB username
SURREAL_PASS	root	SurrealDB password

Application

Variable	Default	Description
OPEN_NOTEBOOK_PASSWORD	None	Optional password protection for the web UI
UPLOAD_DIR	/app/uploads	Directory for uploaded file storage

AI Provider Keys (Legacy)

API keys can also be set via environment variables for legacy compatibility. The preferred method is using the credentials API or UI.

Variable	Provider
OPENAI_API_KEY	OpenAI
ANTHROPIC_API_KEY	Anthropic
GOOGLE_API_KEY	Google GenAI
GROQ_API_KEY	Groq
MISTRAL_API_KEY	Mistral
ELEVENLABS_API_KEY	ElevenLabs

AI Provider Configuration

Via UI

1. Go to Settings > API Keys
2. Click Add Credential
3. Select provider, enter API key and optional base URL
4. Click Test Connection to verify
5. Click Discover Models to find available models
6. Select models to register

Via API

import requests

BASE_URL = "http://localhost:5055/api"

# 1. Create credential
cred = requests.post(f"{BASE_URL}/credentials", json={
    "provider": "anthropic",
    "name": "Anthropic Production",
    "api_key": "sk-ant-..."
}).json()

# 2. Test connection
test = requests.post(f"{BASE_URL}/credentials/{cred['id']}/test").json()
assert test["success"]

# 3. Discover and register models
discovered = requests.post(
    f"{BASE_URL}/credentials/{cred['id']}/discover"
).json()

requests.post(
    f"{BASE_URL}/credentials/{cred['id']}/register-models",
    json={"model_ids": [m["id"] for m in discovered["models"]]}
)

# 4. Auto-assign defaults
requests.post(f"{BASE_URL}/models/auto-assign")

Using Ollama (Free Local Inference)

For free AI inference without API costs, use Ollama:

# docker-compose-ollama.yml addition
services:
  ollama:
    image: ollama/ollama:latest
    volumes:
      - ollama_data:/root/.ollama
    ports:
      - "11434:11434"

Then configure Ollama as a provider with base URL http://ollama:11434.

Security Configuration

Password Protection

Set OPEN_NOTEBOOK_PASSWORD to require authentication:

export OPEN_NOTEBOOK_PASSWORD="your-ui-password"

Reverse Proxy (Nginx Example)

server {
    listen 443 ssl;
    server_name notebook.example.com;

    ssl_certificate /etc/ssl/certs/cert.pem;
    ssl_certificate_key /etc/ssl/private/key.pem;

    location / {
        proxy_pass http://localhost:8502;
        proxy_http_version 1.1;
        proxy_set_header Upgrade $http_upgrade;
        proxy_set_header Connection "upgrade";
        proxy_set_header Host $host;
    }

    location /api/ {
        proxy_pass http://localhost:5055/api/;
        proxy_set_header Host $host;
    }
}

Backup and Restore

Backup SurrealDB Data

# Export database
docker exec surrealdb surreal export \
  --conn ws://localhost:8000 \
  --user root --pass root \
  --ns open_notebook --db open_notebook \
  /tmp/backup.surql

# Copy backup from container
docker cp surrealdb:/tmp/backup.surql ./backup.surql

Backup Uploaded Files

# Copy upload volume contents
docker cp open-notebook:/app/uploads ./uploads_backup/

Restore

# Import database backup
docker cp ./backup.surql surrealdb:/tmp/backup.surql
docker exec surrealdb surreal import \
  --conn ws://localhost:8000 \
  --user root --pass root \
  --ns open_notebook --db open_notebook \
  /tmp/backup.surql