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[Upstream sync] mims-harvard/ToolUniverse (github) — 0 added, 9 modified #26

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promptadmin wants to merge 9 commits from upstream-sync/tooluniverse-20260721-be422b-rxvf into main
pull from: upstream-sync/tooluniverse-20260721-be422b-rxvf
merge into: :main
Conversation 0 Commits 9 Files Changed 9
+82 -42
promptadmin commented 2026-07-21 09:47:43 +00:00
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Upstream sync from mims-harvard/ToolUniverse (github)

Source: https://github.com/mims-harvard/ToolUniverse
Forge: github
Compare: bdcca503...be422b18

Scan summary

Category Files
Prompt / Skill files 5
Catalogue / Reference files 4

Prompt files are stored under upstream/{owner}-{repo}/
Catalogue files are stored under upstream/{owner}-{repo}/catalogue/

Decision required

Option Action
Accept Merge this PR — changes ingested into PromptNotes
Reject Close this PR — local version preserved unchanged
Modify Edit files in this branch before merging

Backup rights: If the upstream repository is later deleted or made private,
the last accepted version in PromptNotes is retained under backup rights.

Files modified (9)

  • skills/setup-tooluniverse/SKILL.md
  • skills/tooluniverse-claude-code-plugin/SKILL.md
  • skills/tooluniverse-precision-oncology/API_USAGE_PATTERNS.md
  • skills/tooluniverse-precision-oncology/TOOLS_REFERENCE.md
  • skills/tooluniverse-protein-interactions/DOMAIN_ANALYSIS.md
  • skills/tooluniverse-rare-disease-diagnosis/TOOLS_REFERENCE.md
  • skills/tooluniverse-statistical-modeling/TOOLS_REFERENCE.md
  • skills/tooluniverse-variant-interpretation/TOOLS_REFERENCE.md
  • skills/tooluniverse/SKILL.md

Auto-generated by PromptNotes upstream tracker v2 · 2026-07-21 09:47 UTC

## Upstream sync from `mims-harvard/ToolUniverse` (github) **Source:** https://github.com/mims-harvard/ToolUniverse **Forge:** github **Compare:** [bdcca503...be422b18](https://github.com/mims-harvard/ToolUniverse/compare/bdcca503...be422b18) --- ## Scan summary | Category | Files | |----------|-------| | Prompt / Skill files | 5 | | Catalogue / Reference files | 4 | > Prompt files are stored under `upstream/{owner}-{repo}/` > Catalogue files are stored under `upstream/{owner}-{repo}/catalogue/` --- ## Decision required | Option | Action | |--------|--------| | **Accept** | Merge this PR — changes ingested into PromptNotes | | **Reject** | Close this PR — local version preserved unchanged | | **Modify** | Edit files in this branch before merging | > **Backup rights:** If the upstream repository is later deleted or made private, > the last accepted version in PromptNotes is retained under backup rights. --- ## Files modified (9) - `skills/setup-tooluniverse/SKILL.md` - `skills/tooluniverse-claude-code-plugin/SKILL.md` - `skills/tooluniverse-precision-oncology/API_USAGE_PATTERNS.md` - `skills/tooluniverse-precision-oncology/TOOLS_REFERENCE.md` - `skills/tooluniverse-protein-interactions/DOMAIN_ANALYSIS.md` - `skills/tooluniverse-rare-disease-diagnosis/TOOLS_REFERENCE.md` - `skills/tooluniverse-statistical-modeling/TOOLS_REFERENCE.md` - `skills/tooluniverse-variant-interpretation/TOOLS_REFERENCE.md` - `skills/tooluniverse/SKILL.md` --- *Auto-generated by PromptNotes upstream tracker v2 · 2026-07-21 09:47 UTC*
promptadmin added 9 commits 2026-07-21 09:47:54 +00:00
[upstream-sync] skills/setup-tooluniverse/SKILL.md from mims-harvard/ToolUniverse@be422b18 [catalogue] fc058e6fc2
[upstream-sync] skills/tooluniverse-claude-code-plugin/SKILL.md from mims-harvard/ToolUniverse@be422b18 [catalogue] 171c0f0ecd
[upstream-sync] skills/tooluniverse-precision-oncology/API_USAGE_PATTERNS.md from mims-harvard/ToolUniverse@be422b18 [prompt] 6d606440b2
[upstream-sync] skills/tooluniverse-precision-oncology/TOOLS_REFERENCE.md from mims-harvard/ToolUniverse@be422b18 [unknown] 596accceb5
[upstream-sync] skills/tooluniverse-protein-interactions/DOMAIN_ANALYSIS.md from mims-harvard/ToolUniverse@be422b18 [unknown] 3ab3499236
[upstream-sync] skills/tooluniverse-rare-disease-diagnosis/TOOLS_REFERENCE.md from mims-harvard/ToolUniverse@be422b18 [prompt] cc11704adf
[upstream-sync] skills/tooluniverse-statistical-modeling/TOOLS_REFERENCE.md from mims-harvard/ToolUniverse@be422b18 [prompt] 1ee997aae5
[upstream-sync] skills/tooluniverse-variant-interpretation/TOOLS_REFERENCE.md from mims-harvard/ToolUniverse@be422b18 [prompt] 000d085571
[upstream-sync] skills/tooluniverse/SKILL.md from mims-harvard/ToolUniverse@be422b18 [skill] a0199807d7
This pull request has changes conflicting with the target branch.
  • upstream/mims-harvard-ToolUniverse/catalogue/skills/setup-tooluniverse/SKILL.md
  • upstream/mims-harvard-ToolUniverse/catalogue/skills/tooluniverse-claude-code-plugin/SKILL.md
  • upstream/mims-harvard-ToolUniverse/skills/tooluniverse/SKILL.md
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From your project repository, check out a new branch and test the changes.
git fetch -u origin upstream-sync/tooluniverse-20260721-be422b-rxvf:upstream-sync/tooluniverse-20260721-be422b-rxvf
git checkout upstream-sync/tooluniverse-20260721-be422b-rxvf
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Reference: promptadmin/drug-discovery-prompts#26