[Upstream sync] inoue0426/awesome-computational-biology (github) — 6 added, 10 modified #97

Merged

promptadmin merged 16 commits from upstream-sync/awesome-computational-biology-20261026-4ed7cf-usit into main

2026-10-26 16:40:56 +00:00

promptadmin commented

2026-10-26 16:31:32 +00:00

Owner

Upstream sync from `inoue0426/awesome-computational-biology` (github)

Source: https://github.com/inoue0426/awesome-computational-biology
Forge: github
Compare: c6f07d90...4ed7cfef

Scan summary

Category	Files
Prompt / Skill files	0
Catalogue / Reference files	16

Prompt files are stored under upstream/{owner}-{repo}/
Catalogue files are stored under upstream/{owner}-{repo}/catalogue/

Decision required

Option	Action
Accept	Merge this PR — changes ingested into PromptNotes
Reject	Close this PR — local version preserved unchanged
Modify	Edit files in this branch before merging

Backup rights: If the upstream repository is later deleted or made private,
the last accepted version in PromptNotes is retained under backup rights.

Files added (6)

data/enrichment.agent-explorer-v1.yml
data/enrichment.foundation-explorer-v1.yml
data/enrichment.foundation-models-v3.yml
data/enrichment.genetic-perturbation-v1.yml
data/enrichment.method-explorer-v1.yml
data/enrichment.perturbation-datasets-v1.yml

Files modified (10)

.github/workflows/ai4bio-schema-check.yml
README.md
cspell.json
data/enrichment.benchmark-v2.yml
data/enrichment.cancer-databases-v1.yml
data/enrichment.pharmacogenomics-v1.yml
data/resources.json
data/resources.yml
docs/data/SCHEMA.md
docs/data/resources.json

Auto-generated by PromptNotes upstream tracker v2 · 2026-10-26 16:31 UTC

## Upstream sync from `inoue0426/awesome-computational-biology` (github) **Source:** https://github.com/inoue0426/awesome-computational-biology **Forge:** github **Compare:** [c6f07d90...4ed7cfef](https://github.com/inoue0426/awesome-computational-biology/compare/c6f07d90...4ed7cfef) --- ## Scan summary | Category | Files | |----------|-------| | Prompt / Skill files | 0 | | Catalogue / Reference files | 16 | > Prompt files are stored under `upstream/{owner}-{repo}/` > Catalogue files are stored under `upstream/{owner}-{repo}/catalogue/` --- ## Decision required | Option | Action | |--------|--------| | **Accept** | Merge this PR — changes ingested into PromptNotes | | **Reject** | Close this PR — local version preserved unchanged | | **Modify** | Edit files in this branch before merging | > **Backup rights:** If the upstream repository is later deleted or made private, > the last accepted version in PromptNotes is retained under backup rights. --- ## Files added (6) - `data/enrichment.agent-explorer-v1.yml` - `data/enrichment.foundation-explorer-v1.yml` - `data/enrichment.foundation-models-v3.yml` - `data/enrichment.genetic-perturbation-v1.yml` - `data/enrichment.method-explorer-v1.yml` - `data/enrichment.perturbation-datasets-v1.yml` ## Files modified (10) - `.github/workflows/ai4bio-schema-check.yml` - `README.md` - `cspell.json` - `data/enrichment.benchmark-v2.yml` - `data/enrichment.cancer-databases-v1.yml` - `data/enrichment.pharmacogenomics-v1.yml` - `data/resources.json` - `data/resources.yml` - `docs/data/SCHEMA.md` - `docs/data/resources.json` --- *Auto-generated by PromptNotes upstream tracker v2 · 2026-10-26 16:31 UTC*

promptadmin added 16 commits 2026-10-26 16:31:34 +00:00